Dataset NameNCBI metadata for reads in the EMERGE Umbrella BioProject (PRJNA888099), matched to metadata from JGI (where applicable) and to standardized EMERGE SampleID__ (when possible).
DatasetID0164_EMERGE_SRA_metadata
Dataset Package0060_sequencing_metadata
Labels
  • Metadata
  • A2A
  • Soil
  • IsoGenie
  • Public
  • Sequencing
Contributor/Contact

Suzanne Hodgkins

suzanne.b.hodgkins@gmail.com

Data file(s), original
External repository link(s)

EMERGE Umbrella BioProject: PRJNA888099

Quality Level 1
Current Version & Date 0.0.0 (2025-02-22)
Dataset NotesSRA metadata ("NCBI_Kingfisher" columns) was downloaded from NCBI using the Kingfisher metadata annotation tool (https://wwood.github.io/kingfisher-download/). Metadata for JGI reads ("JGI" columns) was obtained from Sample Reports downloaded from the JGI Genome Portal (https://genome.jgi.doe.gov/portal/) for EMERGE-associated JGI projects.
Related Datasets (from same Dataset Package)
Friendly URL https://emerge-db.asc.ohio-state.edu/datasources/0164_EMERGE_SRA_metadata