Dataset Name | NCBI metadata for reads in the EMERGE Umbrella BioProject (PRJNA888099), matched to metadata from JGI (where applicable) and to standardized EMERGE SampleID__ (when possible). |
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DatasetID | 0164_EMERGE_SRA_metadata |
Dataset Package | 0060_sequencing_metadata |
Labels |
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Contributor/Contact |
Suzanne Hodgkins suzanne.b.hodgkins@gmail.com |
Data file(s), original | |
External repository link(s) | |
Quality Level | 1 |
Current Version & Date | 0.0.0 (2025-02-22) |
Dataset Notes | SRA metadata ("NCBI_Kingfisher" columns) was downloaded from NCBI using the Kingfisher metadata annotation tool (https://wwood.github.io/kingfisher-download/). Metadata for JGI reads ("JGI" columns) was obtained from Sample Reports downloaded from the JGI Genome Portal (https://genome.jgi.doe.gov/portal/) for EMERGE-associated JGI projects. |
Related Datasets (from same Dataset Package) | |
Friendly URL | https://emerge-db.asc.ohio-state.edu/datasources/0164_EMERGE_SRA_metadata |